Source code for deepmd.tf.utils.graph

# SPDX-License-Identifier: LGPL-3.0-or-later
import re
from typing import (
    Dict,
    Tuple,
)

import numpy as np

from deepmd.tf.env import (
    ATTENTION_LAYER_PATTERN,
    EMBEDDING_NET_PATTERN,
    FITTING_NET_PATTERN,
    TYPE_EMBEDDING_PATTERN,
    tf,
)
from deepmd.tf.utils.errors import (
    GraphWithoutTensorError,
)
from deepmd.tf.utils.sess import (
    run_sess,
)


[docs] def load_graph_def(model_file: str) -> Tuple[tf.Graph, tf.GraphDef]: """Load graph as well as the graph_def from the frozen model(model_file). Parameters ---------- model_file : str The input frozen model path Returns ------- tf.Graph The graph loaded from the frozen model tf.GraphDef The graph_def loaded from the frozen model """ graph_def = tf.GraphDef() with open(model_file, "rb") as f: graph_def.ParseFromString(f.read()) with tf.Graph().as_default() as graph: tf.import_graph_def(graph_def, name="") return graph, graph_def
[docs] def get_tensor_by_name_from_graph(graph: tf.Graph, tensor_name: str) -> tf.Tensor: """Load tensor value from the given tf.Graph object. Parameters ---------- graph : tf.Graph The input TensorFlow graph tensor_name : str Indicates which tensor which will be loaded from the frozen model Returns ------- tf.Tensor The tensor which was loaded from the frozen model Raises ------ GraphWithoutTensorError Whether the tensor_name is within the frozen model """ try: tensor = graph.get_tensor_by_name(tensor_name + ":0") except KeyError as e: raise GraphWithoutTensorError() from e with tf.Session(graph=graph) as sess: tensor = run_sess(sess, tensor) return tensor
[docs] def get_tensor_by_name(model_file: str, tensor_name: str) -> tf.Tensor: """Load tensor value from the frozen model(model_file). Parameters ---------- model_file : str The input frozen model path tensor_name : str Indicates which tensor which will be loaded from the frozen model Returns ------- tf.Tensor The tensor which was loaded from the frozen model Raises ------ GraphWithoutTensorError Whether the tensor_name is within the frozen model """ graph, _ = load_graph_def(model_file) return get_tensor_by_name_from_graph(graph, tensor_name)
[docs] def get_pattern_nodes_from_graph_def(graph_def: tf.GraphDef, pattern: str) -> Dict: """Get the pattern nodes with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object pattern The node pattern within the graph_def Returns ------- Dict The fitting net nodes within the given tf.GraphDef object """ nodes = {} pattern = re.compile(pattern) for node in graph_def.node: if re.fullmatch(pattern, node.name) is not None: nodes[node.name] = node.attr["value"].tensor return nodes
[docs] def get_embedding_net_nodes_from_graph_def( graph_def: tf.GraphDef, suffix: str = "" ) -> Dict: """Get the embedding net nodes with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object suffix : str, optional The scope suffix Returns ------- Dict The embedding net nodes within the given tf.GraphDef object """ # embedding_net_pattern = f"filter_type_\d+{suffix}/matrix_\d+_\d+|filter_type_\d+{suffix}/bias_\d+_\d+|filter_type_\d+{suffix}/idt_\d+_\d+|filter_type_all{suffix}/matrix_\d+_\d+|filter_type_all{suffix}/matrix_\d+_\d+_\d+|filter_type_all{suffix}/bias_\d+_\d+|filter_type_all{suffix}/bias_\d+_\d+_\d+|filter_type_all{suffix}/idt_\d+_\d+" if suffix != "": embedding_net_pattern = ( EMBEDDING_NET_PATTERN.replace("/(idt)", suffix + "/(idt)") .replace("/(bias)", suffix + "/(bias)") .replace("/(matrix)", suffix + "/(matrix)") ) else: embedding_net_pattern = EMBEDDING_NET_PATTERN embedding_net_nodes = get_pattern_nodes_from_graph_def( graph_def, embedding_net_pattern ) return embedding_net_nodes
[docs] def get_embedding_net_nodes(model_file: str, suffix: str = "") -> Dict: """Get the embedding net nodes with the given frozen model(model_file). Parameters ---------- model_file The input frozen model path suffix : str, optional The suffix of the scope Returns ------- Dict The embedding net nodes with the given frozen model """ _, graph_def = load_graph_def(model_file) return get_embedding_net_nodes_from_graph_def(graph_def, suffix=suffix)
[docs] def get_embedding_net_variables_from_graph_def( graph_def: tf.GraphDef, suffix: str = "" ) -> Dict: """Get the embedding net variables with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object suffix : str, optional The suffix of the scope Returns ------- Dict The embedding net variables within the given tf.GraphDef object """ embedding_net_nodes = get_embedding_net_nodes_from_graph_def( graph_def, suffix=suffix ) return convert_tensor_to_ndarray_in_dict(embedding_net_nodes)
[docs] def get_extra_embedding_net_suffix(type_one_side: bool): """Get the extra embedding net suffix according to the value of type_one_side. Parameters ---------- type_one_side The value of type_one_side Returns ------- str The extra embedding net suffix """ if type_one_side: extra_suffix = "_one_side_ebd" else: extra_suffix = "_two_side_ebd" return extra_suffix
[docs] def get_extra_embedding_net_nodes_from_graph_def( graph_def: tf.GraphDef, suffix: str = "", extra_suffix: str = "", ) -> Dict: """Get the extra embedding net nodes with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object suffix : str, optional The scope suffix extra_suffix : str The extra scope suffix Returns ------- Dict The embedding net nodes within the given tf.GraphDef object """ embedding_net_pattern_strip = str( rf"filter_type_(all)/(matrix)_(\d+){extra_suffix}|" rf"filter_type_(all)/(bias)_(\d+){extra_suffix}|" rf"filter_type_(all)/(idt)_(\d+){extra_suffix}|" )[:-1] if suffix != "": embedding_net_pattern_strip = ( embedding_net_pattern_strip.replace("/(idt)", suffix + "/(idt)") .replace("/(bias)", suffix + "/(bias)") .replace("/(matrix)", suffix + "/(matrix)") ) embedding_net_nodes_strip = get_pattern_nodes_from_graph_def( graph_def, embedding_net_pattern_strip ) return embedding_net_nodes_strip
[docs] def get_extra_embedding_net_variables_from_graph_def( graph_def: tf.GraphDef, suffix: str = "", extra_suffix: str = "", ) -> Dict: """Get the embedding net variables with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object suffix : str, optional The suffix of the scope extra_suffix The extra scope suffix Returns ------- Dict The embedding net variables within the given tf.GraphDef object """ extra_embedding_net_nodes = get_extra_embedding_net_nodes_from_graph_def( graph_def, extra_suffix=extra_suffix, suffix=suffix ) return convert_tensor_to_ndarray_in_dict(extra_embedding_net_nodes)
[docs] def get_embedding_net_variables(model_file: str, suffix: str = "") -> Dict: """Get the embedding net variables with the given frozen model(model_file). Parameters ---------- model_file The input frozen model path suffix : str, optional The suffix of the scope Returns ------- Dict The embedding net variables within the given frozen model """ _, graph_def = load_graph_def(model_file) return get_embedding_net_variables_from_graph_def(graph_def, suffix=suffix)
[docs] def get_fitting_net_nodes_from_graph_def( graph_def: tf.GraphDef, suffix: str = "" ) -> Dict: """Get the fitting net nodes with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object suffix suffix of the scope Returns ------- Dict The fitting net nodes within the given tf.GraphDef object """ if suffix != "": fitting_net_pattern = ( FITTING_NET_PATTERN.replace("/(idt)", suffix + "/(idt)") .replace("/(bias)", suffix + "/(bias)") .replace("/(matrix)", suffix + "/(matrix)") ) else: fitting_net_pattern = FITTING_NET_PATTERN fitting_net_nodes = get_pattern_nodes_from_graph_def(graph_def, fitting_net_pattern) for key in fitting_net_nodes.keys(): assert ( key.find("bias") > 0 or key.find("matrix") > 0 or key.find("idt") > 0 ), "currently, only support weight matrix, bias and idt at the model compression process!" return fitting_net_nodes
[docs] def get_fitting_net_nodes(model_file: str) -> Dict: """Get the fitting net nodes with the given frozen model(model_file). Parameters ---------- model_file The input frozen model path Returns ------- Dict The fitting net nodes with the given frozen model """ _, graph_def = load_graph_def(model_file) return get_fitting_net_nodes_from_graph_def(graph_def)
[docs] def get_fitting_net_variables_from_graph_def( graph_def: tf.GraphDef, suffix: str = "" ) -> Dict: """Get the fitting net variables with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object suffix suffix of the scope Returns ------- Dict The fitting net variables within the given tf.GraphDef object """ fitting_net_nodes = get_fitting_net_nodes_from_graph_def(graph_def, suffix=suffix) return convert_tensor_to_ndarray_in_dict(fitting_net_nodes)
[docs] def get_fitting_net_variables(model_file: str, suffix: str = "") -> Dict: """Get the fitting net variables with the given frozen model(model_file). Parameters ---------- model_file The input frozen model path suffix suffix of the scope Returns ------- Dict The fitting net variables within the given frozen model """ _, graph_def = load_graph_def(model_file) return get_fitting_net_variables_from_graph_def(graph_def, suffix=suffix)
[docs] def get_type_embedding_net_nodes_from_graph_def( graph_def: tf.GraphDef, suffix: str = "" ) -> Dict: """Get the type embedding net nodes with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object suffix : str, optional The scope suffix Returns ------- Dict The type embedding net nodes within the given tf.GraphDef object """ if suffix != "": type_embedding_net_pattern = ( TYPE_EMBEDDING_PATTERN.replace("/(idt)", suffix + "/(idt)") .replace("/(bias)", suffix + "/(bias)") .replace("/(matrix)", suffix + "/(matrix)") ) else: type_embedding_net_pattern = TYPE_EMBEDDING_PATTERN type_embedding_net_nodes = get_pattern_nodes_from_graph_def( graph_def, type_embedding_net_pattern ) return type_embedding_net_nodes
[docs] def get_type_embedding_net_variables_from_graph_def( graph_def: tf.GraphDef, suffix: str = "" ) -> Dict: """Get the type embedding net variables with the given tf.GraphDef object. Parameters ---------- graph_def : tf.GraphDef The input tf.GraphDef object suffix : str, optional The suffix of the scope Returns ------- Dict The embedding net variables within the given tf.GraphDef object """ type_embedding_net_nodes = get_type_embedding_net_nodes_from_graph_def( graph_def, suffix=suffix ) return convert_tensor_to_ndarray_in_dict(type_embedding_net_nodes)
[docs] def get_attention_layer_nodes_from_graph_def( graph_def: tf.GraphDef, suffix: str = "" ) -> Dict: """Get the attention layer nodes with the given tf.GraphDef object. Parameters ---------- graph_def The input tf.GraphDef object suffix : str, optional The scope suffix Returns ------- Dict The attention layer nodes within the given tf.GraphDef object """ if suffix != "": attention_layer_pattern = ( ATTENTION_LAYER_PATTERN.replace("/(c_query)", suffix + "/(c_query)") .replace("/(c_key)", suffix + "/(c_key)") .replace("/(c_value)", suffix + "/(c_value)") .replace("/(c_out)", suffix + "/(c_out)") .replace("/(layer_normalization)", suffix + "/(layer_normalization)") ) else: attention_layer_pattern = ATTENTION_LAYER_PATTERN attention_layer_nodes = get_pattern_nodes_from_graph_def( graph_def, attention_layer_pattern ) return attention_layer_nodes
[docs] def get_attention_layer_variables_from_graph_def( graph_def: tf.GraphDef, suffix: str = "" ) -> Dict: """Get the attention layer variables with the given tf.GraphDef object. Parameters ---------- graph_def : tf.GraphDef The input tf.GraphDef object suffix : str, optional The suffix of the scope Returns ------- Dict The attention layer variables within the given tf.GraphDef object """ attention_layer_net_nodes = get_attention_layer_nodes_from_graph_def( graph_def, suffix=suffix ) return convert_tensor_to_ndarray_in_dict(attention_layer_net_nodes)
[docs] def convert_tensor_to_ndarray_in_dict( tensor_dict: Dict[str, tf.Tensor], ) -> Dict[str, np.ndarray]: """Convert tensor to ndarray in dict. Parameters ---------- tensor_dict : Dict[str, tf.Tensor] The input tensor dict Returns ------- Dict[str, np.ndarray] The converted tensor dict """ for key in tensor_dict: tensor_dict[key] = tf.make_ndarray(tensor_dict[key]) return tensor_dict